| # | League Two | PTS | MP | W | D | L | GS | GC | Form |
|---|---|---|---|---|---|---|---|---|---|
| 1 |  Swindon Town | 93 | 46 | 29 | 6 | 11 | 75 | 32 | WLLWD |
| 2 |  Shrewsbury | 88 | 46 | 26 | 10 | 10 | 66 | 41 | WWDWL |
| 3 |  Crawley Town | 84 | 46 | 23 | 15 | 8 | 76 | 54 | DWDLW |
| 4 |  Southend | 83 | 46 | 25 | 8 | 13 | 77 | 48 | WWWLD |
| 5 |  Torquay | 81 | 46 | 23 | 12 | 11 | 63 | 50 | LDLLL |
| 6 |  Cheltenham | 77 | 46 | 23 | 8 | 15 | 66 | 50 | WWWWL |
| 7 |  Crewe | 72 | 46 | 20 | 12 | 14 | 67 | 59 | DDWDW |
| 8 |  Gillingham | 70 | 46 | 20 | 10 | 16 | 79 | 62 | LDWDW |
| 9 |  Oxford United | 68 | 46 | 17 | 17 | 12 | 59 | 48 | DDDLL |
| 10 |  Rotherham | 67 | 46 | 18 | 13 | 15 | 67 | 63 | WLWDD |
| 11 |  Aldershot Town | 66 | 46 | 19 | 9 | 18 | 54 | 52 | DWWDD |
| 12 |  Port Vale | 59 | 46 | 20 | 9 | 17 | 68 | 60 | DLWLW |
| 13 |  Bristol Rovers | 57 | 46 | 15 | 12 | 19 | 60 | 70 | LWLWL |
| 14 |  Accrington ST | 57 | 46 | 14 | 15 | 17 | 54 | 66 | WLDLL |
| 15 |  Morecambe | 56 | 46 | 14 | 14 | 18 | 63 | 57 | LDLDL |
| 16 | AFC Wimbledon | 54 | 46 | 15 | 9 | 22 | 62 | 78 | LDWLW |
| 17 |  Burton Albion | 54 | 46 | 14 | 12 | 20 | 54 | 81 | WLLWL |
| 18 |  Bradford | 50 | 46 | 12 | 14 | 20 | 54 | 59 | LWWLD |
| 19 |  Dagenham & Redbridge | 50 | 46 | 14 | 8 | 24 | 50 | 72 | WDDLW |
| 20 |  Northampton | 48 | 46 | 12 | 12 | 22 | 56 | 79 | LLDDD |
| 21 |  Plymouth | 46 | 46 | 10 | 16 | 20 | 47 | 64 | WLDDL |
| 22 |  Barnet | 46 | 46 | 12 | 10 | 24 | 52 | 79 | LDLWW |
| 23 | Hereford United | 44 | 46 | 10 | 14 | 22 | 50 | 70 | LDDWW |
| 24 |  Macclesfield | 37 | 46 | 8 | 13 | 25 | 39 | 64 | LDLLL |
